Software 
Standalone applications CDF Creator
CDF Creator
Authors: Roman Jaksik, Michał Marczyk, Andrzej Polański, Joanna Polańska
CDF Creator allows to make custom Affymetrix microarray Chip Definition Files (CDFs) selecting probes that should be used in the study and assigning them to gene-specific sets. To prepare the basic CDF version only a list of probesets with individual probe coordinates is required.
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Citation:
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| Marczyk M, Jaksik R, Polański A, Polańska J. Affymetrix chip definition files construction based on custom probe set annotation database, Studies in Computational Intelligence 381 (2011) 135-144 Jaksik R, Polanska J, Herok R, Rzeszowska-Wolny J, Calculation of reliable transcript levels of annotated genes on the basis of multiple probe-sets in Affymetrix microarrays, Acta Biochim Pol, 56 (2009) 271-277 |
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Acknowledgment:
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NucleoAnnot application was developed as a part of the GENEPI low-RT project (FP6-036452) by A.Polanski, J.Polanska M.Marczyk and R.Jaksik |
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Available application versions:
